No. words: 1449; after pruning: 1423


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.5 (1,1:566)  514  0.53 0.35 0.53  BE518446Ld02P026B09P026F111F1_017.ab1        1   569 (172)  C BE518446Ld02P026B09P026F111R1_017.ab1   (140)   568     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  270 nodes

 137 str. conn. components

Path
    1  C BE518446Ld02P026B09P026F111R1_017.ab1   708 
  302    BE518446Ld02P026B09P026F111F1_017.ab1   160 
  326  C BE518446Ld02P026B09P026F111R1_017.ab1   383 
  334    BE518446Ld02P026B09P026F111F1_017.ab1   192 
  342  C BE518446Ld02P026B09P026F111R1_017.ab1   367 
  594    BE518446Ld02P026B09P026F111F1_017.ab1   452 
  602  C BE518446Ld02P026B09P026F111R1_017.ab1   107 
  626    BE518446Ld02P026B09P026F111F1_017.ab1   484 
  638  C BE518446Ld02P026B09P026F111R1_017.ab1    71 
  646    BE518446Ld02P026B09P026F111F1_017.ab1   504 
Contig length: old 882, new 883

Contig length: old 883, new 883
New start: 0