No. words: 1433; after pruning: 1407


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.0 (1,1:558)  524  0.00 0.18 0.36  BE518446Ld08P026B09P026F111F1_022.ab1        1   560 (172)  C BE518446Ld08P026B09P026F111R1_022.ab1   (142)   559     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  272 nodes

 138 str. conn. components

Path
    1  C BE518446Ld08P026B09P026F111R1_022.ab1   701 
  169    BE518446Ld08P026B09P026F111F1_022.ab1    26 
  185  C BE518446Ld08P026B09P026F111R1_022.ab1   517 
  201    BE518446Ld08P026B09P026F111F1_022.ab1    58 
  209  C BE518446Ld08P026B09P026F111R1_022.ab1   493 
  225    BE518446Ld08P026B09P026F111F1_022.ab1    82 
  233  C BE518446Ld08P026B09P026F111R1_022.ab1   469 
  281    BE518446Ld08P026B09P026F111F1_022.ab1   138 
  325  C BE518446Ld08P026B09P026F111R1_022.ab1   377 
  505    BE518446Ld08P026B09P026F111F1_022.ab1   362 
  521  C BE518446Ld08P026B09P026F111R1_022.ab1   181 
  577    BE518446Ld08P026B09P026F111F1_022.ab1   434 
  637  C BE518446Ld08P026B09P026F111R1_022.ab1    65 
  649    BE518446Ld08P026B09P026F111F1_022.ab1   506 
Contig length: old 874, new 875

Contig length: old 875, new 875
New start: 0