No. words: 1035; after pruning: 1009


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 8.9 (1,1:471)  446  0.00 0.00 0.21  BE585797At02P026C09P026G111F1_071.ab1        1   468 (39)  C BE585797At02P026C09P026G111R1_071.ab1   (57)   471     5 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  232 nodes

 118 str. conn. components

Path
    1  C BE585797At02P026C09P026G111R1_071.ab1   528 
  101    BE585797At02P026C09P026G111F1_071.ab1    44 
  109  C BE585797At02P026C09P026G111R1_071.ab1   420 
  117    BE585797At02P026C09P026G111F1_071.ab1    60 
  201  C BE585797At02P026C09P026G111R1_071.ab1   328 
  205    BE585797At02P026C09P026G111F1_071.ab1   148 
  301  C BE585797At02P026C09P026G111R1_071.ab1   228 
  305    BE585797At02P026C09P026G111F1_071.ab1   248 
Contig length: old 563, new 564

Contig length: old 564, new 564
New start: 0