No. words: 1273; after pruning: 1247


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.3 (1,1:464)  448  0.00 0.00 0.00  BE585797Ld01P026C09P026G111F1_069.ab1        1   465 (186)  C BE585797Ld01P026C09P026G111R1_069.ab1   (157)   465     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  234 nodes

 119 str. conn. components

Path
    1  C BE585797Ld01P026C09P026G111R1_069.ab1   622 
  221    BE585797Ld01P026C09P026G111F1_069.ab1    64 
  237  C BE585797Ld01P026C09P026G111R1_069.ab1   386 
  245    BE585797Ld01P026C09P026G111F1_069.ab1    88 
  261  C BE585797Ld01P026C09P026G111R1_069.ab1   362 
  265    BE585797Ld01P026C09P026G111F1_069.ab1   108 
  413  C BE585797Ld01P026C09P026G111R1_069.ab1   210 
  417    BE585797Ld01P026C09P026G111F1_069.ab1   260 
  421  C BE585797Ld01P026C09P026G111R1_069.ab1   202 
  425    BE585797Ld01P026C09P026G111F1_069.ab1   268 
Contig length: old 808, new 808

Contig length: old 808, new 808
New start: 0