No. words: 1216; after pruning: 1190


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.8 (1,1:441)  425  0.00 0.00 0.00  BE585797Ld05P026C09P026G111F1_078.ab1        1   442 (185)  C BE585797Ld05P026C09P026G111R1_078.ab1   (147)   442     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  222 nodes

 113 str. conn. components

Path
    1  C BE585797Ld05P026C09P026G111R1_078.ab1   589 
  155    BE585797Ld05P026C09P026G111F1_078.ab1     8 
  159  C BE585797Ld05P026C09P026G111R1_078.ab1   431 
  175    BE585797Ld05P026C09P026G111F1_078.ab1    28 
  179  C BE585797Ld05P026C09P026G111R1_078.ab1   411 
  219    BE585797Ld05P026C09P026G111F1_078.ab1    72 
  227  C BE585797Ld05P026C09P026G111R1_078.ab1   363 
  327    BE585797Ld05P026C09P026G111F1_078.ab1   180 
  363  C BE585797Ld05P026C09P026G111R1_078.ab1   227 
  387    BE585797Ld05P026C09P026G111F1_078.ab1   240 
  431  C BE585797Ld05P026C09P026G111R1_078.ab1   159 
  447    BE585797Ld05P026C09P026G111F1_078.ab1   300 
  471  C BE585797Ld05P026C09P026G111R1_078.ab1   119 
  475    BE585797Ld05P026C09P026G111F1_078.ab1   328 
Contig length: old 774, new 774

Contig length: old 774, new 774
New start: 0