No. words: 1231; after pruning: 1205


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 8.3 (1,1:455)  422  0.00 0.22 0.44  BE585797Ld08P026C09P026G111F1_072.ab1        1   453 (134)  C BE585797Ld08P026C09P026G111R1_072.ab1   (188)   456     5 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  220 nodes

 112 str. conn. components

Path
    1  C BE585797Ld08P026C09P026G111R1_072.ab1   644 
  506    BE585797Ld08P026C09P026G111F1_072.ab1   317 
  522  C BE585797Ld08P026C09P026G111R1_072.ab1   123 
  530    BE585797Ld08P026C09P026G111F1_072.ab1   341 
  546  C BE585797Ld08P026C09P026G111R1_072.ab1    99 
  558    BE585797Ld08P026C09P026G111F1_072.ab1   369 
  614  C BE585797Ld08P026C09P026G111R1_072.ab1    31 
  618    BE585797Ld08P026C09P026G111F1_072.ab1   429 
Contig length: old 775, new 776

Contig length: old 776, new 776
New start: 0