No. words: 1216; after pruning: 1190


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.8 (1,1:440)  425  0.00 0.00 0.00  BE585797Ld09P026C09P026G111F1_070.ab1        1   441 (146)  C BE585797Ld09P026C09P026G111R1_070.ab1   (188)   441     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  222 nodes

 113 str. conn. components

Path
    1  C BE585797Ld09P026C09P026G111R1_070.ab1   629 
  480    BE585797Ld09P026C09P026G111F1_070.ab1   292 
  504  C BE585797Ld09P026C09P026G111R1_070.ab1   126 
  516    BE585797Ld09P026C09P026G111F1_070.ab1   328 
Contig length: old 775, new 775

Contig length: old 775, new 775
New start: 0