No. words: 990; after pruning: 964


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 8.1 (1,1:446)  419  0.00 0.22 0.22  BE585797Tu02P026C09P026G111F1_079.ab1        1   446 (42)  C BE585797Tu02P026C09P026G111R1_079.ab1   (55)   447     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  216 nodes

 110 str. conn. components

Path
    1  C BE585797Tu02P026C09P026G111R1_079.ab1   502 
   63    BE585797Tu02P026C09P026G111F1_079.ab1     8 
   67  C BE585797Tu02P026C09P026G111R1_079.ab1   436 
  141    BE585797Tu02P026C09P026G111F1_079.ab1    85 
  165  C BE585797Tu02P026C09P026G111R1_079.ab1   338 
  245    BE585797Tu02P026C09P026G111F1_079.ab1   189 
  361  C BE585797Tu02P026C09P026G111R1_079.ab1   142 
  373    BE585797Tu02P026C09P026G111F1_079.ab1   317 
  421  C BE585797Tu02P026C09P026G111R1_079.ab1    82 
  425    BE585797Tu02P026C09P026G111F1_079.ab1   369 
Contig length: old 543, new 544

Contig length: old 544, new 544
New start: 0