No. words: 1377; after pruning: 1351


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.8 (1,1:648)  625  0.00 0.00 0.15  BE586090At01P026D09P026H111F1_094.ab1        1   649 (43)  C BE586090At01P026D09P026H111R1_094.ab1   (37)   648     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  324 nodes

 164 str. conn. components

Path
    1  C BE586090At01P026D09P026H111R1_094.ab1   685 
  273    BE586090At01P026D09P026H111F1_094.ab1   236 
  277  C BE586090At01P026D09P026H111R1_094.ab1   409 
  281    BE586090At01P026D09P026H111F1_094.ab1   244 
  285  C BE586090At01P026D09P026H111R1_094.ab1   401 
  385    BE586090At01P026D09P026H111F1_094.ab1   348 
  393  C BE586090At01P026D09P026H111R1_094.ab1   293 
  489    BE586090At01P026D09P026H111F1_094.ab1   452 
  529  C BE586090At01P026D09P026H111R1_094.ab1   157 
  545    BE586090At01P026D09P026H111F1_094.ab1   508 
  645  C BE586090At01P026D09P026H111R1_094.ab1    41 
  649    BE586090At01P026D09P026H111F1_094.ab1   612 
Contig length: old 728, new 729

Contig length: old 729, new 729
New start: 0