No. words: 1347; after pruning: 1321


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.8 (1,1:674)  606  0.31 0.00 0.00  BE586090At02P026D09P026H111F1_092.ab1        1   635 (0)  C BE586090At02P026D09P026H111R1_092.ab1   (37)   675    41 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  312 nodes

 158 str. conn. components

Path
    1  C BE586090At02P026D09P026H111R1_092.ab1   712 
  427    BE586090At02P026D09P026H111F1_092.ab1   390 
  479  C BE586090At02P026D09P026H111R1_092.ab1   234 
Contig length: old 712, new 712

Contig length: old 712, new 712
New start: 0