No. words: 1074; after pruning: 1048


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.7 (1,1:375)  356  0.00 0.27 0.00  BE586090Ld06P026D09P026H111F1_030.ab1        1   376 (181)  C BE586090Ld06P026D09P026H111R1_030.ab1   (140)   377     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  188 nodes

 96 str. conn. components

Path
    1  C BE586090Ld06P026D09P026H111R1_030.ab1   517 
  378    BE586090Ld06P026D09P026H111F1_030.ab1   237 
Contig length: old 698, new 698

Contig length: old 698, new 698
New start: 0