No. words: 1264; after pruning: 1238


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.6 (1,1:508)  453  2.55 0.00 0.00  BE586090Tu01P026D09P026H111F1_087.ab1        1   509 (72)  C BE586090Tu01P026D09P026H111R1_087.ab1   (174)   509     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  224 nodes

 114 str. conn. components

Path
    1  C BE586090Tu01P026D09P026H111R1_087.ab1   683 
  371    BE586090Tu01P026D09P026H111F1_087.ab1   197 
  375  C BE586090Tu01P026D09P026H111R1_087.ab1   309 
  383    BE586090Tu01P026D09P026H111F1_087.ab1   209 
  395  C BE586090Tu01P026D09P026H111R1_087.ab1   289 
  399    BE586090Tu01P026D09P026H111F1_087.ab1   225 
  403  C BE586090Tu01P026D09P026H111R1_087.ab1   281 
  443    BE586090Tu01P026D09P026H111F1_087.ab1   269 
  447  C BE586090Tu01P026D09P026H111R1_087.ab1   237 
  451    BE586090Tu01P026D09P026H111F1_087.ab1   277 
  455  C BE586090Tu01P026D09P026H111R1_087.ab1   229 
  459    BE586090Tu01P026D09P026H111F1_087.ab1   285 
  463  C BE586090Tu01P026D09P026H111R1_087.ab1   221 
  523    BE586090Tu01P026D09P026H111F1_087.ab1   349 
  531  C BE586090Tu01P026D09P026H111R1_087.ab1   153 
  539    BE586090Tu01P026D09P026H111F1_087.ab1   365 
  543  C BE586090Tu01P026D09P026H111R1_087.ab1   141 
  555    BE586090Tu01P026D09P026H111F1_087.ab1   381 
  563  C BE586090Tu01P026D09P026H111R1_087.ab1   121 
  567    BE586090Tu01P026D09P026H111F1_087.ab1   393 
  571  C BE586090Tu01P026D09P026H111R1_087.ab1   113 
  643    BE586090Tu01P026D09P026H111F1_087.ab1   469 
  651  C BE586090Tu01P026D09P026H111R1_087.ab1    33 
  659    BE586090Tu01P026D09P026H111F1_087.ab1   485 
  671  C BE586090Tu01P026D09P026H111R1_087.ab1    13 
  679    BE586090Tu01P026D09P026H111F1_087.ab1   505 
Contig length: old 755, new 755

Contig length: old 755, new 755
New start: 0