No. words: 1452; after pruning: 1426


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 0.3 (1,1:1399)   42  5.77 0.00 0.00  BE590775At02P026E09P026A121F1_045.ab1      598   649 (0)  C BE590775At02P026E09P026A121R1_045.ab1   (0)   803   752 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  20 nodes

 12 str. conn. components

Path
    1    BE590775At02P026E09P026A121F1_045.ab1     1 
  601  C BE590775At02P026E09P026A121R1_045.ab1   800 
  615    BE590775At02P026E09P026A121F1_045.ab1   615 
  619  C BE590775At02P026E09P026A121R1_045.ab1   782 
Contig length: old 1400, new 1400

Contig length: old 1400, new 1400
New start: 0