No. words: 1724; after pruning: 1684


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.5 (1,1:1048)  647  0.59 0.00 0.30  BE591013As02P026F09P026B121F1_037.ab1      140   815 (0)  C BE591013As02P026F09P026B121R1_037.ab1   (0)   909   236 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  322 nodes

 163 str. conn. components

Path
    1    BE591013As02P026F09P026B121F1_037.ab1     1 
  401  C BE591013As02P026F09P026B121R1_037.ab1   649 
  409    BE591013As02P026F09P026B121F1_037.ab1   409 
  425  C BE591013As02P026F09P026B121R1_037.ab1   625 
  433    BE591013As02P026F09P026B121F1_037.ab1   433 
  441  C BE591013As02P026F09P026B121R1_037.ab1   609 
  468    BE591013As02P026F09P026B121F1_037.ab1   468 
  472  C BE591013As02P026F09P026B121R1_037.ab1   578 
Contig length: old 1049, new 1049

Contig length: old 1049, new 1049
New start: 0