No. words: 1602; after pruning: 1576


Histogram of relative pair offsets, for read pairs with multiple alignments:
31     4
62     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.7 (1,1:1052)  533  0.55 0.00 0.00  BE591013At02P026F09P026B121F1_033.ab1      270   818 (0)  C BE591013At02P026F09P026B121R1_033.ab1   (0)   784   236 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  268 nodes

 136 str. conn. components

Path
    1    BE591013At02P026F09P026B121F1_033.ab1     1 
  405  C BE591013At02P026F09P026B121R1_033.ab1   649 
  413    BE591013At02P026F09P026B121F1_033.ab1   413 
  417  C BE591013At02P026F09P026B121R1_033.ab1   637 
  465    BE591013At02P026F09P026B121F1_033.ab1   465 
  469  C BE591013At02P026F09P026B121R1_033.ab1   585 
  485    BE591013At02P026F09P026B121F1_033.ab1   485 
  497  C BE591013At02P026F09P026B121R1_033.ab1   557 
  509    BE591013At02P026F09P026B121F1_033.ab1   509 
  513  C BE591013At02P026F09P026B121R1_033.ab1   541 
  517    BE591013At02P026F09P026B121F1_033.ab1   517 
  525  C BE591013At02P026F09P026B121R1_033.ab1   529 
  533    BE591013At02P026F09P026B121F1_033.ab1   533 
  545  C BE591013At02P026F09P026B121R1_033.ab1   509 
  549    BE591013At02P026F09P026B121F1_033.ab1   549 
  561  C BE591013At02P026F09P026B121R1_033.ab1   493 
  585    BE591013At02P026F09P026B121F1_033.ab1   585 
  589  C BE591013At02P026F09P026B121R1_033.ab1   465 
Contig length: old 1053, new 1053

Contig length: old 1053, new 1053
New start: 0