No. words: 1366; after pruning: 1340


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.1 (1,1:985)  361  0.26 0.53 0.26  BE591013Ld03P026F09P026B121F1_022.ab1      289   668 (0)  C BE591013Ld03P026F09P026B121R1_022.ab1   (0)   698   318 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  178 nodes

 91 str. conn. components

Path
    1    BE591013Ld03P026F09P026B121F1_022.ab1     1 
  424  C BE591013Ld03P026F09P026B121R1_022.ab1   564 
  428    BE591013Ld03P026F09P026B121F1_022.ab1   428 
  432  C BE591013Ld03P026F09P026B121R1_022.ab1   556 
  444    BE591013Ld03P026F09P026B121F1_022.ab1   444 
  460  C BE591013Ld03P026F09P026B121R1_022.ab1   528 
Contig length: old 986, new 987

Contig length: old 987, new 987
New start: 0