No. words: 1299; after pruning: 1273


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.6 (1,1:497)  483  0.00 0.40 0.00  BE591099Ld02P103B06P103B121F1_019.ab1        1   497 (133)  C BE591099Ld02P103B06P103B121R1_019.ab1   (170)   499     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  244 nodes

 124 str. conn. components

Path
    1  C BE591099Ld02P103B06P103B121R1_019.ab1   669 
  425    BE591099Ld02P103B06P103B121F1_019.ab1   253 
  457  C BE591099Ld02P103B06P103B121R1_019.ab1   213 
  501    BE591099Ld02P103B06P103B121F1_019.ab1   329 
Contig length: old 801, new 802

Contig length: old 802, new 802
New start: 0