No. words: 1285; after pruning: 1259


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.7 (1,1:482)  468  0.00 0.41 0.00  BE591099Ld03P103B06P103B121F1_017.ab1        1   482 (148)  C BE591099Ld03P103B06P103B121R1_017.ab1   (171)   484     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  236 nodes

 120 str. conn. components

Path
    1  C BE591099Ld03P103B06P103B121R1_017.ab1   655 
  333    BE591099Ld03P103B06P103B121F1_017.ab1   160 
  481  C BE591099Ld03P103B06P103B121R1_017.ab1   175 
  501    BE591099Ld03P103B06P103B121F1_017.ab1   328 
Contig length: old 802, new 803

Contig length: old 803, new 803
New start: 0