No. words: 1248; after pruning: 1222


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.5 (1,1:486)  477  0.00 0.21 0.00  BE591099Ld07P103B06P103B121F1_026.ab1        1   487 (149)  C BE591099Ld07P103B06P103B121R1_026.ab1   (124)   488     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  242 nodes

 123 str. conn. components

Path
    1  C BE591099Ld07P103B06P103B121R1_026.ab1   612 
  178    BE591099Ld07P103B06P103B121F1_026.ab1    53 
  182  C BE591099Ld07P103B06P103B121R1_026.ab1   431 
  262    BE591099Ld07P103B06P103B121F1_026.ab1   137 
  366  C BE591099Ld07P103B06P103B121R1_026.ab1   247 
  370    BE591099Ld07P103B06P103B121F1_026.ab1   245 
  434  C BE591099Ld07P103B06P103B121R1_026.ab1   179 
  438    BE591099Ld07P103B06P103B121F1_026.ab1   313 
Contig length: old 761, new 761

Contig length: old 761, new 761
New start: 0