No. words: 1249; after pruning: 1223


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.9 (1,1:488)  474  0.00 0.41 0.00  BE591099Ld08P103B06P103B121F1_024.ab1        1   488 (131)  C BE591099Ld08P103B06P103B121R1_024.ab1   (140)   490     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  238 nodes

 121 str. conn. components

Path
    1  C BE591099Ld08P103B06P103B121R1_024.ab1   630 
  196    BE591099Ld08P103B06P103B121F1_024.ab1    54 
  200  C BE591099Ld08P103B06P103B121R1_024.ab1   431 
  280    BE591099Ld08P103B06P103B121F1_024.ab1   138 
  384  C BE591099Ld08P103B06P103B121R1_024.ab1   247 
  388    BE591099Ld08P103B06P103B121F1_024.ab1   246 
  452  C BE591099Ld08P103B06P103B121R1_024.ab1   179 
  468    BE591099Ld08P103B06P103B121F1_024.ab1   326 
Contig length: old 760, new 761

Contig length: old 761, new 761
New start: 0