No. words: 715; after pruning: 689


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 2.8 (1,1:433)  165  2.67 0.00 0.00  BE591099Tu01P103B06P103B121F1_069.ab1        1   187 (0)  C BE591099Tu01P103B06P103B121R1_069.ab1   (94)   434   248 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  90 nodes

 47 str. conn. components

Path
    1  C BE591099Tu01P103B06P103B121R1_069.ab1   528 
  102    BE591099Tu01P103B06P103B121F1_069.ab1     8 
  110  C BE591099Tu01P103B06P103B121R1_069.ab1   419 
  114    BE591099Tu01P103B06P103B121F1_069.ab1    20 
  118  C BE591099Tu01P103B06P103B121R1_069.ab1   411 
  141    BE591099Tu01P103B06P103B121F1_069.ab1    47 
  185  C BE591099Tu01P103B06P103B121R1_069.ab1   344 
Contig length: old 528, new 528

Contig length: old 528, new 528
New start: 0