No. words: 1030; after pruning: 1004


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.1 (1,1:353)  339  0.00 0.28 0.56  BE591181Ld01P026G09P026C121F1_035.ab1        1   355 (179)  C BE591181Ld01P026G09P026C121R1_035.ab1   (142)   354     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  168 nodes

 86 str. conn. components

Path
    1  C BE591181Ld01P026G09P026C121R1_035.ab1   496 
  378    BE591181Ld01P026G09P026C121F1_035.ab1   235 
  386  C BE591181Ld01P026G09P026C121R1_035.ab1   111 
  398    BE591181Ld01P026G09P026C121F1_035.ab1   255 
  406  C BE591181Ld01P026G09P026C121R1_035.ab1    91 
  426    BE591181Ld01P026G09P026C121F1_035.ab1   283 
Contig length: old 676, new 677

Contig length: old 677, new 677
New start: 0