No. words: 1047; after pruning: 1021


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.4 (1,1:360)  350  0.00 0.28 0.28  BE591181Ld03P026G09P026C121F1_048.ab1        1   361 (173)  C BE591181Ld03P026G09P026C121R1_048.ab1   (152)   361     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  176 nodes

 90 str. conn. components

Path
    1  C BE591181Ld03P026G09P026C121R1_048.ab1   513 
  180    BE591181Ld03P026G09P026C121F1_048.ab1    27 
  196  C BE591181Ld03P026G09P026C121R1_048.ab1   318 
  204    BE591181Ld03P026G09P026C121F1_048.ab1    51 
  220  C BE591181Ld03P026G09P026C121R1_048.ab1   294 
  228    BE591181Ld03P026G09P026C121F1_048.ab1    75 
  236  C BE591181Ld03P026G09P026C121R1_048.ab1   278 
  244    BE591181Ld03P026G09P026C121F1_048.ab1    91 
  248  C BE591181Ld03P026G09P026C121R1_048.ab1   266 
  264    BE591181Ld03P026G09P026C121F1_048.ab1   111 
  372  C BE591181Ld03P026G09P026C121R1_048.ab1   142 
  380    BE591181Ld03P026G09P026C121F1_048.ab1   227 
  408  C BE591181Ld03P026G09P026C121R1_048.ab1   106 
  412    BE591181Ld03P026G09P026C121F1_048.ab1   259 
Contig length: old 686, new 687

Contig length: old 687, new 687
New start: 0