No. words: 1028; after pruning: 1002


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 3.8 (1,1:353)  339  0.28 0.28 0.28  BE591181Ld10P026G09P026C121F1_034.ab1        1   354 (179)  C BE591181Ld10P026G09P026C121R1_034.ab1   (141)   354     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  166 nodes

 85 str. conn. components

Path
    1  C BE591181Ld10P026G09P026C121R1_034.ab1   495 
  329    BE591181Ld10P026G09P026C121F1_034.ab1   187 
  341  C BE591181Ld10P026G09P026C121R1_034.ab1   155 
  381    BE591181Ld10P026G09P026C121F1_034.ab1   239 
  413  C BE591181Ld10P026G09P026C121R1_034.ab1    83 
  417    BE591181Ld10P026G09P026C121F1_034.ab1   275 
Contig length: old 674, new 675

Contig length: old 675, new 675
New start: 0