No. words: 1569; after pruning: 1487


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.4 (1,1:805)  731  0.66 0.13 0.00  BE591222As01P078E03P078E091F1_078.ab1       42   803 (0)  C BE591222As01P078E03P078E091R1_078.ab1   (0)   766     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  362 nodes

 183 str. conn. components

Path
    1    BE591222As01P078E03P078E091F1_078.ab1     1 
  186  C BE591222As01P078E03P078E091R1_078.ab1   621 
  190    BE591222As01P078E03P078E091F1_078.ab1   190 
  305  C BE591222As01P078E03P078E091R1_078.ab1   502 
  309    BE591222As01P078E03P078E091F1_078.ab1   309 
  337  C BE591222As01P078E03P078E091R1_078.ab1   470 
  341    BE591222As01P078E03P078E091F1_078.ab1   341 
  357  C BE591222As01P078E03P078E091R1_078.ab1   450 
  361    BE591222As01P078E03P078E091F1_078.ab1   361 
  393  C BE591222As01P078E03P078E091R1_078.ab1   414 
  397    BE591222As01P078E03P078E091F1_078.ab1   397 
  401  C BE591222As01P078E03P078E091R1_078.ab1   406 
  409    BE591222As01P078E03P078E091F1_078.ab1   409 
  413  C BE591222As01P078E03P078E091R1_078.ab1   394 
  421    BE591222As01P078E03P078E091F1_078.ab1   421 
  425  C BE591222As01P078E03P078E091R1_078.ab1   382 
  429    BE591222As01P078E03P078E091F1_078.ab1   429 
  449  C BE591222As01P078E03P078E091R1_078.ab1   358 
  461    BE591222As01P078E03P078E091F1_078.ab1   461 
  469  C BE591222As01P078E03P078E091R1_078.ab1   338 
  485    BE591222As01P078E03P078E091F1_078.ab1   485 
  497  C BE591222As01P078E03P078E091R1_078.ab1   310 
  533    BE591222As01P078E03P078E091F1_078.ab1   533 
  545  C BE591222As01P078E03P078E091R1_078.ab1   262 
  549    BE591222As01P078E03P078E091F1_078.ab1   549 
  553  C BE591222As01P078E03P078E091R1_078.ab1   254 
  565    BE591222As01P078E03P078E091F1_078.ab1   565 
  573  C BE591222As01P078E03P078E091R1_078.ab1   234 
  585    BE591222As01P078E03P078E091F1_078.ab1   585 
  589  C BE591222As01P078E03P078E091R1_078.ab1   218 
  605    BE591222As01P078E03P078E091F1_078.ab1   605 
  613  C BE591222As01P078E03P078E091R1_078.ab1   194 
  745    BE591222As01P078E03P078E091F1_078.ab1   745 
  749  C BE591222As01P078E03P078E091R1_078.ab1    58 
  753    BE591222As01P078E03P078E091F1_078.ab1   753 
  757  C BE591222As01P078E03P078E091R1_078.ab1    50 
Contig length: old 806, new 806

Contig length: old 806, new 806
New start: 0 
S Change at: 729; seg lengths: entry 1, contig 1