No. words: 1313; after pruning: 1287


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.9 (1,1:731)  570  0.00 0.00 0.00  BE591222Ld06P078E03P078E091F1_038.ab1       69   649 (0)  C BE591222Ld06P078E03P078E091R1_038.ab1   (0)   664    84 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  292 nodes

 148 str. conn. components

Path
    1    BE591222Ld06P078E03P078E091F1_038.ab1     1 
  280  C BE591222Ld06P078E03P078E091R1_038.ab1   453 
  328    BE591222Ld06P078E03P078E091F1_038.ab1   328 
  340  C BE591222Ld06P078E03P078E091R1_038.ab1   393 
  344    BE591222Ld06P078E03P078E091F1_038.ab1   344 
  352  C BE591222Ld06P078E03P078E091R1_038.ab1   381 
  376    BE591222Ld06P078E03P078E091F1_038.ab1   376 
  388  C BE591222Ld06P078E03P078E091R1_038.ab1   345 
  392    BE591222Ld06P078E03P078E091F1_038.ab1   392 
  476  C BE591222Ld06P078E03P078E091R1_038.ab1   257 
  484    BE591222Ld06P078E03P078E091F1_038.ab1   484 
  488  C BE591222Ld06P078E03P078E091R1_038.ab1   245 
Contig length: old 732, new 732

Contig length: old 732, new 732
New start: 0