No. words: 1218; after pruning: 1192


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.2 (1,1:758)  447  0.00 0.00 0.00  BE591222Ld07P078E03P078E091F1_036.ab1      164   622 (0)  C BE591222Ld07P078E03P078E091R1_036.ab1   (0)   596   138 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  230 nodes

 117 str. conn. components

Path
    1    BE591222Ld07P078E03P078E091F1_036.ab1     1 
  391  C BE591222Ld07P078E03P078E091R1_036.ab1   369 
  407    BE591222Ld07P078E03P078E091F1_036.ab1   407 
  419  C BE591222Ld07P078E03P078E091R1_036.ab1   341 
  423    BE591222Ld07P078E03P078E091F1_036.ab1   423 
  487  C BE591222Ld07P078E03P078E091R1_036.ab1   273 
Contig length: old 759, new 759

Contig length: old 759, new 759
New start: 0