No. words: 1321; after pruning: 1295


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.8 (1,1:610)  592  0.16 0.16 0.00  BE591222Sn25P078E03P095B101F1_023.ab1        1   611 (50)  C BE591222Sn25P078E03P095B101R1_023.ab1   (48)   612     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  300 nodes

 152 str. conn. components

Path
    1  C BE591222Sn25P078E03P095B101R1_023.ab1   660 
  110    BE591222Sn25P078E03P095B101F1_023.ab1    61 
  114  C BE591222Sn25P078E03P095B101R1_023.ab1   547 
  166    BE591222Sn25P078E03P095B101F1_023.ab1   117 
  170  C BE591222Sn25P078E03P095B101R1_023.ab1   491 
  178    BE591222Sn25P078E03P095B101F1_023.ab1   129 
  202  C BE591222Sn25P078E03P095B101R1_023.ab1   459 
  258    BE591222Sn25P078E03P095B101F1_023.ab1   209 
Contig length: old 710, new 710

Contig length: old 710, new 710
New start: 0