No. words: 1300; after pruning: 1274


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.1 (1,1:590)  578  0.00 0.00 0.00  BE591222Sn29P078E03P095B101F1_019.ab1        1   591 (73)  C BE591222Sn29P078E03P095B101R1_019.ab1   (45)   591     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  298 nodes

 151 str. conn. components

Path
    1  C BE591222Sn29P078E03P095B101R1_019.ab1   636 
   93    BE591222Sn29P078E03P095B101F1_019.ab1    48 
   97  C BE591222Sn29P078E03P095B101R1_019.ab1   540 
  177    BE591222Sn29P078E03P095B101F1_019.ab1   132 
Contig length: old 709, new 709

Contig length: old 709, new 709
New start: 0