No. words: 1367; after pruning: 1341


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 13.0 (1,1:643)  617  0.16 0.16 0.00  BE591222Sn30P095G09P078E091F1_052.ab1        4   644 (49)  C BE591222Sn30P095G09P078E091R1_052.ab1   (32)   642     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  314 nodes

 159 str. conn. components

Path
    1  C BE591222Sn30P095G09P078E091R1_052.ab1   674 
  402    BE591222Sn30P095G09P078E091F1_052.ab1   372 
  418  C BE591222Sn30P095G09P078E091R1_052.ab1   257 
  438    BE591222Sn30P095G09P078E091F1_052.ab1   408 
  462  C BE591222Sn30P095G09P078E091R1_052.ab1   213 
  498    BE591222Sn30P095G09P078E091F1_052.ab1   468 
  566  C BE591222Sn30P095G09P078E091R1_052.ab1   109 
  582    BE591222Sn30P095G09P078E091F1_052.ab1   552 
Contig length: old 723, new 723

Contig length: old 723, new 723
New start: 0