No. words: 1350; after pruning: 1324


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.0 (1,1:630)  614  0.00 0.00 0.00  BE591222Sn31P095G09P078E091F1_049.ab1        1   631 (47)  C BE591222Sn31P095G09P078E091R1_049.ab1   (41)   631     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  318 nodes

 161 str. conn. components

Path
    1  C BE591222Sn31P095G09P078E091R1_049.ab1   672 
   73    BE591222Sn31P095G09P078E091F1_049.ab1    32 
   81  C BE591222Sn31P095G09P078E091R1_049.ab1   592 
  401    BE591222Sn31P095G09P078E091F1_049.ab1   360 
  417  C BE591222Sn31P095G09P078E091R1_049.ab1   256 
  533    BE591222Sn31P095G09P078E091F1_049.ab1   492 
  565  C BE591222Sn31P095G09P078E091R1_049.ab1   108 
  577    BE591222Sn31P095G09P078E091F1_049.ab1   536 
  597  C BE591222Sn31P095G09P078E091R1_049.ab1    76 
  617    BE591222Sn31P095G09P078E091F1_049.ab1   576 
Contig length: old 719, new 719

Contig length: old 719, new 719
New start: 0