No. words: 1317; after pruning: 1291


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.9 (1,1:607)  591  0.00 0.16 0.00  BE591222Sn32P078E03P095B101F1_018.ab1        1   608 (57)  C BE591222Sn32P078E03P095B101R1_018.ab1   (43)   609     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  302 nodes

 153 str. conn. components

Path
    1  C BE591222Sn32P078E03P095B101R1_018.ab1   652 
   70    BE591222Sn32P078E03P095B101F1_018.ab1    26 
   74  C BE591222Sn32P078E03P095B101R1_018.ab1   579 
   90    BE591222Sn32P078E03P095B101F1_018.ab1    46 
   94  C BE591222Sn32P078E03P095B101R1_018.ab1   559 
  178    BE591222Sn32P078E03P095B101F1_018.ab1   134 
Contig length: old 709, new 709

Contig length: old 709, new 709
New start: 0