No. words: 1377; after pruning: 1351


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 13.5 (1,1:653)  630  0.00 0.15 0.00  BE591222Sn32P095G09P078E091F1_050.ab1        4   654 (40)  C BE591222Sn32P095G09P078E091R1_050.ab1   (31)   652     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  324 nodes

 164 str. conn. components

Path
    1  C BE591222Sn32P095G09P078E091R1_050.ab1   683 
   72    BE591222Sn32P095G09P078E091F1_050.ab1    43 
   80  C BE591222Sn32P095G09P078E091R1_050.ab1   604 
  400    BE591222Sn32P095G09P078E091F1_050.ab1   371 
  416  C BE591222Sn32P095G09P078E091R1_050.ab1   268 
  432    BE591222Sn32P095G09P078E091F1_050.ab1   403 
  444  C BE591222Sn32P095G09P078E091R1_050.ab1   240 
  480    BE591222Sn32P095G09P078E091F1_050.ab1   451 
  504  C BE591222Sn32P095G09P078E091R1_050.ab1   180 
  512    BE591222Sn32P095G09P078E091F1_050.ab1   483 
  568  C BE591222Sn32P095G09P078E091R1_050.ab1   116 
  584    BE591222Sn32P095G09P078E091F1_050.ab1   555 
  632  C BE591222Sn32P095G09P078E091R1_050.ab1    52 
  636    BE591222Sn32P095G09P078E091F1_050.ab1   607 
Contig length: old 723, new 723

Contig length: old 723, new 723
New start: 0