No. words: 1321; after pruning: 1295


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.8 (1,1:614)  580  0.49 0.49 0.00  BE591222Ta11P078E03P095B101F1_005.ab1        1   613 (50)  C BE591222Ta11P078E03P095B101R1_005.ab1   (42)   616     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  290 nodes

 147 str. conn. components

Path
    1  C BE591222Ta11P078E03P095B101R1_005.ab1   658 
  406    BE591222Ta11P078E03P095B101F1_005.ab1   363 
  446  C BE591222Ta11P078E03P095B101R1_005.ab1   213 
  450    BE591222Ta11P078E03P095B101F1_005.ab1   407 
  554  C BE591222Ta11P078E03P095B101R1_005.ab1   105 
  558    BE591222Ta11P078E03P095B101F1_005.ab1   515 
Contig length: old 706, new 706

Contig length: old 706, new 706
New start: 0