No. words: 1366; after pruning: 1340


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 13.9 (1,1:644)  625  0.00 0.00 0.00  BE591222Ta11P095G09P078E091F1_037.ab1        4   645 (49)  C BE591222Ta11P095G09P078E091R1_037.ab1   (30)   642     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  322 nodes

 163 str. conn. components

Path
    1  C BE591222Ta11P095G09P078E091R1_037.ab1   672 
   66    BE591222Ta11P095G09P078E091F1_037.ab1    39 
   78  C BE591222Ta11P095G09P078E091R1_037.ab1   595 
  398    BE591222Ta11P095G09P078E091F1_037.ab1   371 
  406  C BE591222Ta11P095G09P078E091R1_037.ab1   267 
  430    BE591222Ta11P095G09P078E091F1_037.ab1   403 
  438  C BE591222Ta11P095G09P078E091R1_037.ab1   235 
  506    BE591222Ta11P095G09P078E091F1_037.ab1   479 
  562  C BE591222Ta11P095G09P078E091R1_037.ab1   111 
  578    BE591222Ta11P095G09P078E091F1_037.ab1   551 
  626  C BE591222Ta11P095G09P078E091R1_037.ab1    47 
  646    BE591222Ta11P095G09P078E091F1_037.ab1   619 
  650  C BE591222Ta11P095G09P078E091R1_037.ab1    23 
  654    BE591222Ta11P095G09P078E091F1_037.ab1   627 
Contig length: old 721, new 721

Contig length: old 721, new 721
New start: 0