No. words: 1323; after pruning: 1297


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.2 (1,1:596)  579  0.00 0.00 0.00  BE591222Ta12P095G09P078E091F1_038.ab1        1   597 (73)  C BE591222Ta12P095G09P078E091R1_038.ab1   (56)   597     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  300 nodes

 152 str. conn. components

Path
    1  C BE591222Ta12P095G09P078E091R1_038.ab1   653 
  368    BE591222Ta12P095G09P078E091F1_038.ab1   312 
  400  C BE591222Ta12P095G09P078E091R1_038.ab1   254 
  432    BE591222Ta12P095G09P078E091F1_038.ab1   376 
  444  C BE591222Ta12P095G09P078E091R1_038.ab1   210 
  484    BE591222Ta12P095G09P078E091F1_038.ab1   428 
  504  C BE591222Ta12P095G09P078E091R1_038.ab1   150 
  508    BE591222Ta12P095G09P078E091F1_038.ab1   452 
  552  C BE591222Ta12P095G09P078E091R1_038.ab1   102 
  584    BE591222Ta12P095G09P078E091F1_038.ab1   528 
Contig length: old 726, new 726

Contig length: old 726, new 726
New start: 0