No. words: 1530; after pruning: 1504


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.6 (1,1:712)  690  0.00 0.14 0.00  BE591222Ta12P095H09P078E091F1_080.ab1        1   713 (48)  C BE591222Ta12P095H09P078E091R1_080.ab1   (55)   714     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  350 nodes

 177 str. conn. components

Path
    1  C BE591222Ta12P095H09P078E091R1_080.ab1   769 
   79    BE591222Ta12P095H09P078E091F1_080.ab1    23 
   87  C BE591222Ta12P095H09P078E091R1_080.ab1   683 
   91    BE591222Ta12P095H09P078E091F1_080.ab1    35 
  139  C BE591222Ta12P095H09P078E091R1_080.ab1   631 
  147    BE591222Ta12P095H09P078E091F1_080.ab1    91 
  451  C BE591222Ta12P095H09P078E091R1_080.ab1   319 
  527    BE591222Ta12P095H09P078E091F1_080.ab1   471 
  555  C BE591222Ta12P095H09P078E091R1_080.ab1   215 
  595    BE591222Ta12P095H09P078E091F1_080.ab1   539 
  619  C BE591222Ta12P095H09P078E091R1_080.ab1   151 
  655    BE591222Ta12P095H09P078E091F1_080.ab1   599 
  663  C BE591222Ta12P095H09P078E091R1_080.ab1   107 
  711    BE591222Ta12P095H09P078E091F1_080.ab1   655 
  719  C BE591222Ta12P095H09P078E091R1_080.ab1    51 
  743    BE591222Ta12P095H09P078E091F1_080.ab1   687 
  747  C BE591222Ta12P095H09P078E091R1_080.ab1    23 
  751    BE591222Ta12P095H09P078E091F1_080.ab1   695 
Contig length: old 817, new 817

Contig length: old 817, new 817
New start: 0