No. words: 1323; after pruning: 1297


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.9 (1,1:615)  594  0.00 0.33 0.00  BE591222Ta13P078E03P095B101F1_003.ab1        1   615 (48)  C BE591222Ta13P078E03P095B101R1_003.ab1   (43)   617     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  304 nodes

 154 str. conn. components

Path
    1  C BE591222Ta13P078E03P095B101R1_003.ab1   660 
  178    BE591222Ta13P078E03P095B101F1_003.ab1   134 
  198  C BE591222Ta13P078E03P095B101R1_003.ab1   463 
  398    BE591222Ta13P078E03P095B101F1_003.ab1   354 
Contig length: old 707, new 707

Contig length: old 707, new 707
New start: 0