No. words: 1533; after pruning: 1507


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)   13    0.0 11.5 (1,1:710)  676  0.14 0.00 0.00  BE591222Ta14P095H09P078E091F1_078.ab1       14   711 (60)  C BE591222Ta14P095H09P078E091R1_078.ab1   (64)   698     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
13       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  348 nodes

 176 str. conn. components

Path
    1  C BE591222Ta14P095H09P078E091R1_078.ab1   762 
   68    BE591222Ta14P095H09P078E091F1_078.ab1    17 
   88  C BE591222Ta14P095H09P078E091R1_078.ab1   675 
   92    BE591222Ta14P095H09P078E091F1_078.ab1    41 
  248  C BE591222Ta14P095H09P078E091R1_078.ab1   515 
  256    BE591222Ta14P095H09P078E091F1_078.ab1   205 
  456  C BE591222Ta14P095H09P078E091R1_078.ab1   307 
  484    BE591222Ta14P095H09P078E091F1_078.ab1   433 
  496  C BE591222Ta14P095H09P078E091R1_078.ab1   267 
  504    BE591222Ta14P095H09P078E091F1_078.ab1   453 
  516  C BE591222Ta14P095H09P078E091R1_078.ab1   247 
  532    BE591222Ta14P095H09P078E091F1_078.ab1   481 
  544  C BE591222Ta14P095H09P078E091R1_078.ab1   219 
  552    BE591222Ta14P095H09P078E091F1_078.ab1   501 
  556  C BE591222Ta14P095H09P078E091R1_078.ab1   207 
  568    BE591222Ta14P095H09P078E091F1_078.ab1   517 
  592  C BE591222Ta14P095H09P078E091R1_078.ab1   171 
  600    BE591222Ta14P095H09P078E091F1_078.ab1   549 
  608  C BE591222Ta14P095H09P078E091R1_078.ab1   155 
  616    BE591222Ta14P095H09P078E091F1_078.ab1   565 
  628  C BE591222Ta14P095H09P078E091R1_078.ab1   135 
  644    BE591222Ta14P095H09P078E091F1_078.ab1   593 
  648  C BE591222Ta14P095H09P078E091R1_078.ab1   115 
  696    BE591222Ta14P095H09P078E091F1_078.ab1   645 
  700  C BE591222Ta14P095H09P078E091R1_078.ab1    63 
  712    BE591222Ta14P095H09P078E091F1_078.ab1   661 
  716  C BE591222Ta14P095H09P078E091R1_078.ab1    47 
  732    BE591222Ta14P095H09P078E091F1_078.ab1   681 
  746  C BE591222Ta14P095H09P078E091R1_078.ab1    17 
  754    BE591222Ta14P095H09P078E091F1_078.ab1   703 
Contig length: old 822, new 822

Contig length: old 822, new 822
New start: 0