No. words: 1274; after pruning: 1248


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.5 (1,1:564)  551  0.00 0.00 0.00  BE591222Ta16P078E03P095B101F1_002.ab1        1   565 (73)  C BE591222Ta16P078E03P095B101R1_002.ab1   (71)   565     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  284 nodes

 144 str. conn. components

Path
    1  C BE591222Ta16P078E03P095B101R1_002.ab1   636 
  187    BE591222Ta16P078E03P095B101F1_002.ab1   116 
  555  C BE591222Ta16P078E03P095B101R1_002.ab1    82 
  571    BE591222Ta16P078E03P095B101F1_002.ab1   500 
  603  C BE591222Ta16P078E03P095B101R1_002.ab1    34 
  607    BE591222Ta16P078E03P095B101F1_002.ab1   536 
Contig length: old 709, new 709

Contig length: old 709, new 709
New start: 0