No. words: 1368; after pruning: 1342


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 13.1 (1,1:645)  617  0.47 0.00 0.00  BE591222Ta16P095G09P078E091F1_034.ab1        4   646 (48)  C BE591222Ta16P095G09P078E091R1_034.ab1   (31)   643     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  316 nodes

 160 str. conn. components

Path
    1  C BE591222Ta16P095G09P078E091R1_034.ab1   674 
  402    BE591222Ta16P095G09P078E091F1_034.ab1   374 
  418  C BE591222Ta16P095G09P078E091R1_034.ab1   257 
  434    BE591222Ta16P095G09P078E091F1_034.ab1   406 
  442  C BE591222Ta16P095G09P078E091R1_034.ab1   233 
  510    BE591222Ta16P095G09P078E091F1_034.ab1   482 
  566  C BE591222Ta16P095G09P078E091R1_034.ab1   109 
  582    BE591222Ta16P095G09P078E091F1_034.ab1   554 
  606  C BE591222Ta16P095G09P078E091R1_034.ab1    69 
  618    BE591222Ta16P095G09P078E091F1_034.ab1   590 
Contig length: old 722, new 722

Contig length: old 722, new 722
New start: 0