No. words: 1568; after pruning: 1542


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.4 (1,1:745)  722  0.00 0.00 0.13  BE591222Ta16P095H09P078E091F1_076.ab1        1   746 (37)  C BE591222Ta16P095H09P078E091R1_076.ab1   (40)   745     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  372 nodes

 188 str. conn. components

Path
    1  C BE591222Ta16P095H09P078E091R1_076.ab1   785 
   52    BE591222Ta16P095H09P078E091F1_076.ab1    12 
   76  C BE591222Ta16P095H09P078E091R1_076.ab1   710 
   80    BE591222Ta16P095H09P078E091F1_076.ab1    40 
   92  C BE591222Ta16P095H09P078E091R1_076.ab1   694 
  100    BE591222Ta16P095H09P078E091F1_076.ab1    60 
  120  C BE591222Ta16P095H09P078E091R1_076.ab1   666 
  124    BE591222Ta16P095H09P078E091F1_076.ab1    84 
  136  C BE591222Ta16P095H09P078E091R1_076.ab1   650 
  144    BE591222Ta16P095H09P078E091F1_076.ab1   104 
  164  C BE591222Ta16P095H09P078E091R1_076.ab1   622 
  172    BE591222Ta16P095H09P078E091F1_076.ab1   132 
  184  C BE591222Ta16P095H09P078E091R1_076.ab1   602 
  188    BE591222Ta16P095H09P078E091F1_076.ab1   148 
  196  C BE591222Ta16P095H09P078E091R1_076.ab1   590 
  208    BE591222Ta16P095H09P078E091F1_076.ab1   168 
  212  C BE591222Ta16P095H09P078E091R1_076.ab1   574 
  216    BE591222Ta16P095H09P078E091F1_076.ab1   176 
  336  C BE591222Ta16P095H09P078E091R1_076.ab1   450 
  344    BE591222Ta16P095H09P078E091F1_076.ab1   304 
  400  C BE591222Ta16P095H09P078E091R1_076.ab1   386 
  404    BE591222Ta16P095H09P078E091F1_076.ab1   364 
  432  C BE591222Ta16P095H09P078E091R1_076.ab1   354 
  448    BE591222Ta16P095H09P078E091F1_076.ab1   408 
  476  C BE591222Ta16P095H09P078E091R1_076.ab1   310 
  488    BE591222Ta16P095H09P078E091F1_076.ab1   448 
  496  C BE591222Ta16P095H09P078E091R1_076.ab1   290 
  508    BE591222Ta16P095H09P078E091F1_076.ab1   468 
  516  C BE591222Ta16P095H09P078E091R1_076.ab1   270 
  536    BE591222Ta16P095H09P078E091F1_076.ab1   496 
  548  C BE591222Ta16P095H09P078E091R1_076.ab1   238 
  584    BE591222Ta16P095H09P078E091F1_076.ab1   544 
  592  C BE591222Ta16P095H09P078E091R1_076.ab1   194 
  612    BE591222Ta16P095H09P078E091F1_076.ab1   572 
  624  C BE591222Ta16P095H09P078E091R1_076.ab1   162 
  664    BE591222Ta16P095H09P078E091F1_076.ab1   624 
  668  C BE591222Ta16P095H09P078E091R1_076.ab1   118 
  760    BE591222Ta16P095H09P078E091F1_076.ab1   720 
Contig length: old 822, new 823

Contig length: old 823, new 823
New start: 0