No. words: 1038; after pruning: 1012


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 4.6 (1,1:646)  328  1.93 0.00 0.28  BE591222Ta18P095G09P078E091F1_064.ab1        4   365 (0)  C BE591222Ta18P095G09P078E091R1_064.ab1   (30)   643   283 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  164 nodes

 84 str. conn. components

Path
    1  C BE591222Ta18P095G09P078E091R1_064.ab1   673 
   66    BE591222Ta18P095G09P078E091F1_064.ab1    39 
   74  C BE591222Ta18P095G09P078E091R1_064.ab1   600 
Contig length: old 673, new 673

Contig length: old 673, new 673
New start: 0