No. words: 1537; after pruning: 1511


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.1 (1,1:723)  705  0.00 0.00 0.00  BE591222Ta20P095H09P078E091F1_072.ab1        1   724 (46)  C BE591222Ta20P095H09P078E091R1_072.ab1   (43)   724     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  364 nodes

 184 str. conn. components

Path
    1  C BE591222Ta20P095H09P078E091R1_072.ab1   767 
   55    BE591222Ta20P095H09P078E091F1_072.ab1    12 
  507  C BE591222Ta20P095H09P078E091R1_072.ab1   261 
  527    BE591222Ta20P095H09P078E091F1_072.ab1   484 
  619  C BE591222Ta20P095H09P078E091R1_072.ab1   149 
  635    BE591222Ta20P095H09P078E091F1_072.ab1   592 
  639  C BE591222Ta20P095H09P078E091R1_072.ab1   129 
  703    BE591222Ta20P095H09P078E091F1_072.ab1   660 
  707  C BE591222Ta20P095H09P078E091R1_072.ab1    61 
  711    BE591222Ta20P095H09P078E091F1_072.ab1   668 
  719  C BE591222Ta20P095H09P078E091R1_072.ab1    49 
  735    BE591222Ta20P095H09P078E091F1_072.ab1   692 
Contig length: old 813, new 813

Contig length: old 813, new 813
New start: 0