No. words: 1333; after pruning: 1307


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.8 (1,1:622)  598  0.48 0.16 0.00  BE591222Td01P078E03P095B101F1_015.ab1        1   623 (42)  C BE591222Td01P078E03P095B101R1_015.ab1   (44)   624     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  300 nodes

 152 str. conn. components

Path
    1  C BE591222Td01P078E03P095B101R1_015.ab1   668 
   63    BE591222Td01P078E03P095B101F1_015.ab1    18 
   67  C BE591222Td01P078E03P095B101R1_015.ab1   602 
  199    BE591222Td01P078E03P095B101F1_015.ab1   154 
  219  C BE591222Td01P078E03P095B101R1_015.ab1   450 
  295    BE591222Td01P078E03P095B101F1_015.ab1   250 
  327  C BE591222Td01P078E03P095B101R1_015.ab1   342 
  399    BE591222Td01P078E03P095B101F1_015.ab1   354 
  459  C BE591222Td01P078E03P095B101R1_015.ab1   210 
  475    BE591222Td01P078E03P095B101F1_015.ab1   430 
  551  C BE591222Td01P078E03P095B101R1_015.ab1   118 
  559    BE591222Td01P078E03P095B101F1_015.ab1   514 
  563  C BE591222Td01P078E03P095B101R1_015.ab1   106 
  571    BE591222Td01P078E03P095B101F1_015.ab1   526 
Contig length: old 710, new 710

Contig length: old 710, new 710
New start: 0