No. words: 1329; after pruning: 1303


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.8 (1,1:620)  593  0.16 0.16 0.32  BE591222Td02P078E03P095B101F1_016.ab1        1   622 (41)  C BE591222Td02P078E03P095B101R1_016.ab1   (45)   621     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  300 nodes

 152 str. conn. components

Path
    1  C BE591222Td02P078E03P095B101R1_016.ab1   666 
  196    BE591222Td02P078E03P095B101F1_016.ab1   150 
  556  C BE591222Td02P078E03P095B101R1_016.ab1   111 
  560    BE591222Td02P078E03P095B101F1_016.ab1   514 
Contig length: old 708, new 709

Contig length: old 709, new 709
New start: 0