No. words: 1361; after pruning: 1335


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.8 (1,1:640)  614  0.31 0.00 0.16  BE591222Td03P095G09P078E091F1_045.ab1        1   641 (36)  C BE591222Td03P095G09P078E091R1_045.ab1   (44)   640     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  316 nodes

 160 str. conn. components

Path
    1  C BE591222Td03P095G09P078E091R1_045.ab1   684 
   76    BE591222Td03P095G09P078E091F1_045.ab1    32 
   80  C BE591222Td03P095G09P078E091R1_045.ab1   605 
  404    BE591222Td03P095G09P078E091F1_045.ab1   360 
  408  C BE591222Td03P095G09P078E091R1_045.ab1   277 
  472    BE591222Td03P095G09P078E091F1_045.ab1   428 
  504  C BE591222Td03P095G09P078E091R1_045.ab1   181 
  532    BE591222Td03P095G09P078E091F1_045.ab1   488 
  600  C BE591222Td03P095G09P078E091R1_045.ab1    85 
  604    BE591222Td03P095G09P078E091F1_045.ab1   560 
Contig length: old 720, new 721

Contig length: old 721, new 721
New start: 0