No. words: 1296; after pruning: 1270


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.2 (1,1:624)  609  0.00 0.16 0.00  BE591222Td06P078E03P095B101F1_012.ab1        1   625 (2)  C BE591222Td06P078E03P095B101R1_012.ab1   (43)   626     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  312 nodes

 158 str. conn. components

Path
    1  C BE591222Td06P078E03P095B101R1_012.ab1   669 
   58    BE591222Td06P078E03P095B101F1_012.ab1    14 
   74  C BE591222Td06P078E03P095B101R1_012.ab1   596 
   78    BE591222Td06P078E03P095B101F1_012.ab1    34 
  114  C BE591222Td06P078E03P095B101R1_012.ab1   556 
  118    BE591222Td06P078E03P095B101F1_012.ab1    74 
  138  C BE591222Td06P078E03P095B101R1_012.ab1   532 
  146    BE591222Td06P078E03P095B101F1_012.ab1   102 
  154  C BE591222Td06P078E03P095B101R1_012.ab1   516 
  162    BE591222Td06P078E03P095B101F1_012.ab1   118 
  186  C BE591222Td06P078E03P095B101R1_012.ab1   484 
  190    BE591222Td06P078E03P095B101F1_012.ab1   146 
  202  C BE591222Td06P078E03P095B101R1_012.ab1   468 
  254    BE591222Td06P078E03P095B101F1_012.ab1   210 
  326  C BE591222Td06P078E03P095B101R1_012.ab1   344 
  398    BE591222Td06P078E03P095B101F1_012.ab1   354 
  422  C BE591222Td06P078E03P095B101R1_012.ab1   248 
  430    BE591222Td06P078E03P095B101F1_012.ab1   386 
  482  C BE591222Td06P078E03P095B101R1_012.ab1   188 
  486    BE591222Td06P078E03P095B101F1_012.ab1   442 
  510  C BE591222Td06P078E03P095B101R1_012.ab1   160 
  514    BE591222Td06P078E03P095B101F1_012.ab1   470 
  526  C BE591222Td06P078E03P095B101R1_012.ab1   144 
  534    BE591222Td06P078E03P095B101F1_012.ab1   490 
  550  C BE591222Td06P078E03P095B101R1_012.ab1   120 
  570    BE591222Td06P078E03P095B101F1_012.ab1   526 
  598  C BE591222Td06P078E03P095B101R1_012.ab1    72 
  614    BE591222Td06P078E03P095B101F1_012.ab1   570 
  626  C BE591222Td06P078E03P095B101R1_012.ab1    44 
  630    BE591222Td06P078E03P095B101F1_012.ab1   586 
  638  C BE591222Td06P078E03P095B101R1_012.ab1    32 
  654    BE591222Td06P078E03P095B101F1_012.ab1   610 
Contig length: old 671, new 671

Contig length: old 671, new 671
New start: 0