No. words: 1356; after pruning: 1330


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.1 (1,1:632)  616  0.00 0.00 0.00  BE591222Td07P095G09P078E091F1_041.ab1        1   633 (48)  C BE591222Td07P095G09P078E091R1_041.ab1   (42)   633     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  318 nodes

 161 str. conn. components

Path
    1  C BE591222Td07P095G09P078E091R1_041.ab1   675 
   74    BE591222Td07P095G09P078E091F1_041.ab1    32 
   82  C BE591222Td07P095G09P078E091R1_041.ab1   594 
  402    BE591222Td07P095G09P078E091F1_041.ab1   360 
  418  C BE591222Td07P095G09P078E091R1_041.ab1   258 
  482    BE591222Td07P095G09P078E091F1_041.ab1   440 
  566  C BE591222Td07P095G09P078E091R1_041.ab1   110 
  578    BE591222Td07P095G09P078E091F1_041.ab1   536 
  598  C BE591222Td07P095G09P078E091R1_041.ab1    78 
  618    BE591222Td07P095G09P078E091F1_041.ab1   576 
  630  C BE591222Td07P095G09P078E091R1_041.ab1    46 
  634    BE591222Td07P095G09P078E091F1_041.ab1   592 
Contig length: old 723, new 723

Contig length: old 723, new 723
New start: 0