No. words: 1378; after pruning: 1352


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 11.6 (1,1:655)  621  0.31 0.15 0.15  BE591222Td09P095G09P078E091F1_039.ab1        4   656 (36)  C BE591222Td09P095G09P078E091R1_039.ab1   (33)   653     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  318 nodes

 161 str. conn. components

Path
    1  C BE591222Td09P095G09P078E091R1_039.ab1   686 
   74    BE591222Td09P095G09P078E091F1_039.ab1    43 
   78  C BE591222Td09P095G09P078E091R1_039.ab1   609 
   98    BE591222Td09P095G09P078E091F1_039.ab1    67 
  106  C BE591222Td09P095G09P078E091R1_039.ab1   581 
  226    BE591222Td09P095G09P078E091F1_039.ab1   195 
  242  C BE591222Td09P095G09P078E091R1_039.ab1   445 
  258    BE591222Td09P095G09P078E091F1_039.ab1   227 
  262  C BE591222Td09P095G09P078E091R1_039.ab1   425 
  402    BE591222Td09P095G09P078E091F1_039.ab1   371 
  406  C BE591222Td09P095G09P078E091R1_039.ab1   281 
  414    BE591222Td09P095G09P078E091F1_039.ab1   383 
  418  C BE591222Td09P095G09P078E091R1_039.ab1   269 
  422    BE591222Td09P095G09P078E091F1_039.ab1   391 
  426  C BE591222Td09P095G09P078E091R1_039.ab1   261 
  450    BE591222Td09P095G09P078E091F1_039.ab1   419 
  458  C BE591222Td09P095G09P078E091R1_039.ab1   229 
  482    BE591222Td09P095G09P078E091F1_039.ab1   451 
  566  C BE591222Td09P095G09P078E091R1_039.ab1   121 
  578    BE591222Td09P095G09P078E091F1_039.ab1   547 
  602  C BE591222Td09P095G09P078E091R1_039.ab1    85 
  610    BE591222Td09P095G09P078E091F1_039.ab1   579 
Contig length: old 722, new 723

Contig length: old 723, new 723
New start: 0